i dont think they broke in the proper components. i think it was a job all together. This rebuilt bottom end doesnt even have 20k on it. what bs.

 

woah, with only 20k on the bottom end it definitely shouldnt be a spun bearing.

 

Finally got it in the shop. Starting with the electrical problem, I think its safe to assume the problem was the aftermarket sound system draining the battery at night. Battery is dead.
Toyota suggests that when a battery is dead, and is jump started the minimal charge is being sent through the electrical system. Supposedly relating to this noise, but they have not heard the noise.
The guy I talk to up there is trying to weasel out of looking internally at the motor. Here is my list of reciepts from Toyota....
$21.36 2/6/02
$85.33 8/22/02
$21.14 10/5/02
$1537.54 4/11/03
$73.55 4/18/03
$263.82 6/25/03
$33.70 8/1803
$15.25 8/30/03
$24.78 8/30/03
$195.49 9/6/03
$0.00 1/29/04
$7862.32 1/31/04
$611.04 2/06/04
$492.83 3/11/04
$1212.67 8/10/04
$16.72 9/24/04
$183.69 9/24/04
$0.00 10/30/04
$49.62 11/02/04
$137.15 11/19/04
$0.00 12/07/04
$22.76 1/25/05
$25.92 9/1/05

I think you can see why I highlighted 2004.