Yes, a remote start can safely be done on a manual tranny. Directed has an interface module available for the manual tranny, though I'm not sure of the part #. I use a Compustar alarm/start combo on my truck. It is designed to work with a manual. They are real nice easy on truck with a clutch start cancel switch. Even trucks without the switch have the plug behind the switch panel where the switch wood be. Still works the same with remote start. I've done many of these. I've been installing audio and security for 13 years. For more help, try
www.the12volt.com . They are loaded with info in relation to this.
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'98 4-Runner
SR5 V6 Automatic
Intake elbow removed, Sony head unit, Sony Class-D amp, Sony 10" sub enclosure and F&R components
Brad Hall
Service Advisor
Nelson Automotive Group
201 Commonwealth Blvd.
Martinsville, VA 24112
276-638-2331
www.autosbynelson.com